Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933459.1_cds_XP_016479746.1_71258
CDS Infomation

[gene=LOC107800997] [db_xref=GeneID:107800997] [protein=rho guanine nucleotide exchange factor 8-like] [protein_id=XP_016479746.1] [location=complement(join(8057..8380,8453..8773,8851..9117,9191..9265,9342..9496,9573..9689,9773..10046))] [gbkey=CDS]
Sequence

ATGGTTAACGAAGAAAATAAGATTCAGAAGTCGAGGTCTTTCAATTTTAGGAAGATATTT
GAGATTCCAAGTAGATTGGCACATAGCATTGGGGGGGAGAGTGGTAGCGATGAAGAGGAC
ATGGATGACAACATTGGCAACGTCCAATTTATTAGCCAAGGCGGAACACCGTCTGTACCT
TTAGAAAATCATCAGATGGATATTGAACCTGTTTCAAGCTTAACCCAGGATGCAGGTAAG
ACAGGAAATACCCGAAAAGATAAAGAACCTTCAGACATGGAATTGATGAAAGAAAGGTTT
GCAAAGCTGCTTTTAGGGGAGGATATGTCAGGAGGAGGAAAAGGTGTTTCATCAGCTCTG
GCTTTATCAAACGCCATTACCAATCTAGCTGCTTCTGTTTTTGGAGAACAATCGAAATTG
GAGCCTATGTCTCAAAAGAGAAAAGAGAGGTGGAGAAAAGAAATCGACTGGCTATTATCC
GTGACAGATTACATTGTTGAGTTTGTCCCCGCGCAACAAAAAGCAAAAGATGGAACAAAC
ATGGAGATAATGGTTACTCAACAAAGAAGAGATCTGGTCATGAACATCCCTGCTCTGAAG
AAGCTTGATGCAATGCTCATTGATTGCTTAGATAACTTCAAAGATGCAAAAGAATTCTGG
TATGTCTCGAGAGATGCTGAAGAATCTGAGAAAGGTGTCCAGAGGACTGATAAATGGTGG
CTACCTACAATCAAGGTTCCACCTGAGGGACTCTCAGATGCTTCCCGGAGATGGCTACAA
TATCAGAAGGATTGTGTGAACCAAGTACTCAAAGCATCCATGGCGATTAACGCTCAAATA
CTAGCAGAAATGGAAGTCCCTGAAAACTACATTGAATCTCTCCCCAAGAATGGTAGATCA
AGTCTTGGTGATTCAATCTACAAGAACATCACGGTCGAATTCTTTGATCCAGACCAATTC
CTTTCAACCATGGACATGTCATCAGAACACAAAGTTCTTGACCTTAAAAACAGAATTGAA
GCATCTATTGTGATTTGGAAGAGGAAGATGCACCAAAAAGATGGAAAATCTTCCTGGGTT
CCAGCTGTGAGTTTGGAGAAGAGGGAGCTCTTTGAAGAGAGAGCAGAGACCATCTTACTC
CTGCTAAAACACAGATTTCCTGGAATTCCTCAATCTTCCCTTGAGATCAGTAAAATCCAA
TATAACAGAGATGTGGGACATGCTGTTCTGGAGAGCTACTCAAGGGTGCTAGAAAGCCTA
GCCAACACAGTTATGTCGCGTATTGAGGATGTCCTATACGCAGATTCTGTCACACAAGAT
CCATCACTTGCAATAGCAAAGTGGAACCCTTCAGCTGAATCTTCACCTCAGCAACCACTA
AGTGGAATGTCAACTCCCAGGGGAGAGTCAGAGATGTTAAGTTCTGCAGCAGAAACACCA
ACCTCAATGACCTTGTCTGACTTCATGGGCTGGAATATGGAGCAAGGAGAGGGAAACATA
ACTAAGAATCAGGAGACTTTTTGCCCAAGATGA

Peptide Sequence

PEP ID

XP_016479746.1
PEP Infomation

PREDICTED: rho guanine nucleotide exchange factor 8-like [Nicotiana tabacum]
Sequence

MVNEENKIQKSRSFNFRKIFEIPSRLAHSIGGESGSDEEDMDDNIGNVQFISQGGTPSVP
LENHQMDIEPVSSLTQDAGKTGNTRKDKEPSDMELMKERFAKLLLGEDMSGGGKGVSSAL
ALSNAITNLAASVFGEQSKLEPMSQKRKERWRKEIDWLLSVTDYIVEFVPAQQKAKDGTN
MEIMVTQQRRDLVMNIPALKKLDAMLIDCLDNFKDAKEFWYVSRDAEESEKGVQRTDKWW
LPTIKVPPEGLSDASRRWLQYQKDCVNQVLKASMAINAQILAEMEVPENYIESLPKNGRS
SLGDSIYKNITVEFFDPDQFLSTMDMSSEHKVLDLKNRIEASIVIWKRKMHQKDGKSSWV
PAVSLEKRELFEERAETILLLLKHRFPGIPQSSLEISKIQYNRDVGHAVLESYSRVLESL
ANTVMSRIEDVLYADSVTQDPSLAIAKWNPSAESSPQQPLSGMSTPRGESEMLSSAAETP
TSMTLSDFMGWNMEQGEGNITKNQETFCPR

Transcript Sequence

Gene sequence data has not been registered.